STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP5Receptor accessory protein 5. (189 aa)    
Predicted Functional Partners:
REEP6
Receptor accessory protein 6.
    
 
 0.950
RTN4
Reticulon 4.
   
 
 0.928
RABAC1
Rab acceptor 1.
   
 
 0.920
RTN3
Reticulon 3.
   
 
 0.918
ESYT1
Extended synaptotagmin 1.
   
 
 0.904
FAM241A
Family with sequence similarity 241 member A.
    
   0.893
ARL6IP1
ADP ribosylation factor like GTPase 6 interacting protein 1.
    
 
 0.873
ATL3
Atlastin GTPase 3.
    
 
 0.859
RPS15A
Ribosomal protein S15a.
    
 
 0.855
ENSCWAP00000026731
annotation not available
    
 
 0.797
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.