STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP5Receptor accessory protein 5. (189 aa)    
Predicted Functional Partners:
RTN2
Reticulon 2.
   
 
 0.726
ATL3
Atlastin GTPase 3.
    
 
 0.705
RTN3
Reticulon 3.
   
 
 0.660
C18orf32
Chromosome 18 open reading frame 32.
      
 0.638
ATL2
Atlastin GTPase 2.
    
 
 0.632
ARL6IP1
ADP ribosylation factor like GTPase 6 interacting protein 1.
    
 
 0.621
RTN4
Reticulon 4.
   
 
 0.621
OCIAD1
OCIA domain containing 1.
      
 0.613
REEP6
Receptor accessory protein 6.
  
 
 
0.605
ATL1
Atlastin GTPase 1.
    
 
 0.602
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.