STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIAChitinase acidic. (471 aa)    
Predicted Functional Partners:
HRG
Histidine rich glycoprotein.
   
  0.948
HEXB
Hexosaminidase subunit beta.
    
 0.898
ENSCWAP00000006149
annotation not available
    
 0.898
CHIT1
Chitinase 1.
     
  0.890
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.880
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.853
LECT2
Leukocyte cell derived chemotaxin 2.
   
    0.809
COX6B1
Cytochrome c oxidase subunit 6B1.
   
 0.808
TRIR
Telomerase RNA component interacting RNase.
   
 0.808
COX6B2
Cytochrome c oxidase subunit 6B2.
   
 0.808
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.