Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAM8ADAM metallopeptidase domain 8. (840 aa)    
Predicted Functional Partners:
DOCK8
Dedicator of cytokinesis 8.
   
  
 0.679
LGI1
Leucine rich glioma inactivated 1.
    
 0.659
ADAM10
ADAM metallopeptidase domain 10.
     
 0.605
MRPL13
Mitochondrial ribosomal protein L13.
      
 0.601
ADAM17
ADAM metallopeptidase domain 17.
     
 0.594
TMPRSS13
Transmembrane serine protease 13.
      
 0.582
ADAM22
ADAM metallopeptidase domain 22.
    
 
 0.575
ASB12
Ankyrin repeat and SOCS box containing 12.
      
 0.570
MERTK
MER proto-oncogene, tyrosine kinase.
    
  0.569
SH3PXD2B
SH3 and PX domains 2B.
    
 0.564
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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