STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPRASRP receptor subunit alpha. (639 aa)    
Predicted Functional Partners:
SRPRB
SRP receptor subunit beta.
  
 0.994
SRP54
Signal recognition particle 54.
  
 0.985
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.981
SRP72
Signal recognition particle 72.
   
 0.976
SRP68
Signal recognition particle 68.
   
 0.950
DDRGK1
DDRGK domain containing 1.
    
 
 0.949
SRP9
Signal recognition particle 9.
    
 0.938
SRP19
Signal recognition particle 19.
   
 
 0.922
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.894
RPL8
Ribosomal protein L8.
    
 
 0.860
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.