STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001121annotation not available (343 aa)    
Predicted Functional Partners:
ENSCWAP00000009129
annotation not available
      
 0.767
DDX4
DEAD-box helicase 4.
    
 
 0.666
PRDM14
PR/SET domain 14.
    
 
 0.653
NANOS3
Nanos C2HC-type zinc finger 3.
      
 0.647
PIWIL4
Piwi like RNA-mediated gene silencing 4.
      
 0.643
ZBTB16
Zinc finger and BTB domain containing 16.
    
 
 0.633
ESRRB
Estrogen related receptor beta.
   
 
 0.625
GFRA1
GDNF family receptor alpha 1.
      
 0.602
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 
 0.600
SALL4
Spalt like transcription factor 4.
   
  
 0.599
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.