STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMTR2Cap methyltransferase 2. (765 aa)    
Predicted Functional Partners:
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
   0.946
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
    
   0.945
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
    
   0.927
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
   0.911
ENSCWAP00000000357
annotation not available
    
   0.871
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
    
   0.871
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
   0.794
ENSCWAP00000010435
annotation not available
    
   0.772
ENSCWAP00000005174
annotation not available
    
   0.769
ENSCWAP00000028091
annotation not available
    
   0.769
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.