Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPM2AEPM2A glucan phosphatase, laforin. (331 aa)    
Predicted Functional Partners:
NHLRC1
NHL repeat containing E3 ubiquitin protein ligase 1.
    
 0.993
STBD1
Starch binding domain 1.
    
 
 0.964
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 
 0.932
PPP1R3C
Protein phosphatase 1 regulatory subunit 3C.
   
 0.846
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
   
 
 0.798
PPP1R3D
Protein phosphatase 1 regulatory subunit 3D.
   
 0.777
PPP1R3G
Protein phosphatase 1 regulatory subunit 3G.
   
 0.727
PPP1R3B
Protein phosphatase 1 regulatory subunit 3B.
   
 0.727
PPP1R3E
Protein phosphatase 1 regulatory subunit 3E.
   
 0.727
GYS1
Glycogen synthase 1.
    
 0.679
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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