STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLUHClustered mitochondria homolog. (1349 aa)    
Predicted Functional Partners:
DLST
Dihydrolipoamide S-succinyltransferase.
   
   0.878
TRAP1
TNF receptor associated protein 1.
   
   0.858
HDLBP
High density lipoprotein binding protein.
   
   0.842
PUM2
Pumilio RNA binding family member 2.
    
   0.812
PUM1
Pumilio RNA binding family member 1.
    
   0.812
USP10
Ubiquitin specific peptidase 10.
    
   0.796
COA8
Cytochrome c oxidase assembly factor 8.
    
   0.791
ENSCWAP00000003047
annotation not available
    
 
 0.785
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
   0.784
PINK1
PTEN induced kinase 1.
    
 
 0.766
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.