STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR179G protein-coupled receptor 179. (2367 aa)    
Predicted Functional Partners:
GNB5
G protein subunit beta 5.
    
 0.789
NME8
NME/NM23 family member 8.
    
   0.766
ZNF48
Zinc finger protein 48.
    
 
 0.712
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
 
 0.701
ENSCWAP00000026214
annotation not available
    
   0.690
GNAT1
G protein subunit alpha transducin 1.
    
 0.650
COMMD9
COMM domain containing 9.
    
 
 0.640
GNB3
G protein subunit beta 3.
    
 0.634
GNB1
G protein subunit beta 1.
    
 0.634
GNB4
G protein subunit beta 4.
    
 0.634
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.