STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001139annotation not available (119 aa)    
Predicted Functional Partners:
ENSCWAP00000001172
annotation not available
 
   
  0.949
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.714
RANBP2
RAN binding protein 2.
    
 0.677
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.657
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.654
NUP107
Nucleoporin 107.
    
 0.632
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.625
NUP133
Nucleoporin 133.
    
 0.624
TEP1
Telomerase associated protein 1.
    
 0.616
NUP85
Nucleoporin 85.
    
 0.598
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.