STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY3RUN and FYVE domain containing 3. (620 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.745
WDFY4
WDFY family member 4.
   
 
 0.668
UTP11
UTP11 small subunit processome component.
      
 0.594
L3HYPDH
trans-L-3-hydroxyproline dehydratase.
      
 0.552
AZI2
5-azacytidine induced 2.
      
 0.547
RUFY1
RUN and FYVE domain containing 1.
  
 
  
0.546
ENSCWAP00000010343
annotation not available
      
 0.541
ENSCWAP00000004355
annotation not available
    
  0.525
RAB4A
RAB4A, member RAS oncogene family.
    
  0.525
FAM234A
Family with sequence similarity 234 member A.
      
 0.521
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.