STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP19Signal recognition particle 19. (144 aa)    
Predicted Functional Partners:
SRP9
Signal recognition particle 9.
   
 0.999
SRP72
Signal recognition particle 72.
   
 0.999
SRP14
Signal recognition particle 14.
   
 0.999
SRP68
Signal recognition particle 68.
   
 0.999
SRP54
Signal recognition particle 54.
   
 0.999
SRPRA
SRP receptor subunit alpha.
   
 
 0.922
RHO
Rhodopsin.
    
   0.922
SRPRB
SRP receptor subunit beta.
   
 
 0.916
RPL23A
Ribosomal protein L23a.
   
 
 0.864
RPL8
Ribosomal protein L8.
    
   0.862
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.