Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TRPC6Transient receptor potential cation channel subfamily C member 6. (932 aa)    
Predicted Functional Partners:
NPHS2
NPHS2 stomatin family member, podocin.
    
 
 0.954
PRKG1
Protein kinase cGMP-dependent 1.
    
 0.929
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.901
PRKG2
Protein kinase cGMP-dependent 2.
    
 0.899
TRPM2
Transient receptor potential cation channel subfamily M member 2.
    
 0.887
TRPM4
Transient receptor potential cation channel subfamily M member 4.
    
 0.871
TRPC4
Transient receptor potential cation channel subfamily C member 4.
   
 0.862
TRPC7
Transient receptor potential cation channel subfamily C member 7.
    
 0.837
TRPC3
Transient receptor potential cation channel subfamily C member 3.
    
 0.837
STIM1
Stromal interaction molecule 1.
    
 0.835
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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