Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN5Spectrin beta, non-erythrocytic 5. (3503 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.970
SPTA1
Spectrin alpha, erythrocytic 1.
   
 0.923
SPTBN2
Spectrin beta, non-erythrocytic 2.
   
  0.903
ENSCWAP00000003680
annotation not available
     
  0.835
ADD2
Adducin 2.
    
 
 0.812
ANK1
Ankyrin 1.
   
 0.775
ANK2
Ankyrin 2.
   
 0.775
ANK3
Ankyrin 3.
   
 0.775
DMTN
Dematin actin binding protein.
   
 
 0.768
ANKDD1B
Ankyrin repeat and death domain containing 1B.
   
 0.699
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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