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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPED1Cadherin like and PC-esterase domain containing 1. (1030 aa)    
Predicted Functional Partners:
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
      
 0.759
NELFCD
Negative elongation factor complex member C/D.
      
 0.685
RBM47
RNA binding motif protein 47.
      
 0.683
C12orf43
Chromosome 12 open reading frame 43.
      
 0.664
CPNE8
Copine 8.
      
 0.620
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
      
 0.602
C2orf73
Chromosome 2 open reading frame 73.
      
 0.551
WWC2
WW and C2 domain containing 2.
      
 0.519
ADAM7
ADAM metallopeptidase domain 7.
      
 0.502
SMIM14
Small integral membrane protein 14.
      
 0.470
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.