STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPSTI1Epithelial stromal interaction 1. (393 aa)    
Predicted Functional Partners:
PARP9
poly(ADP-ribose) polymerase family member 9.
   
  
 0.921
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.916
SAMD9
Sterile alpha motif domain containing 9.
   
  
 0.910
ENSCWAP00000005934
annotation not available
   
  
 0.894
CMPK2
Cytidine/uridine monophosphate kinase 2.
   
  
 0.874
TRNT1
tRNA nucleotidyl transferase 1.
    
   0.868
MX1
MX dynamin like GTPase 1.
   
  
 0.812
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.800
MX2
MX dynamin like GTPase 2.
   
  
 0.790
ISG15
ISG15 ubiquitin like modifier.
   
  
 0.763
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.