STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL23A1Collagen type XXIII alpha 1 chain. (545 aa)    
Predicted Functional Partners:
ENSCWAP00000028023
annotation not available
    
 0.950
COL15A1
Collagen type XV alpha 1 chain.
  
 
0.932
COL21A1
Collagen type XXI alpha 1 chain.
     
0.748
ENSCWAP00000023545
annotation not available
 
   
 0.747
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.740
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.726
COL26A1
Collagen type XXVI alpha 1 chain.
     
 0.717
SPATA17
Spermatogenesis associated 17.
    
 
 0.713
TAF12
TATA-box binding protein associated factor 12.
    
 0.706
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.703
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.