STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001226annotation not available (346 aa)    
Predicted Functional Partners:
CCNH
Cyclin H.
   
 0.980
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.949
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.929
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.927
ENSCWAP00000002207
annotation not available
   
 0.926
ENSCWAP00000004852
annotation not available
    
 0.923
GTF2H3
General transcription factor IIH subunit 3.
    
 0.922
GTF2H1
General transcription factor IIH subunit 1.
    
 0.919
GTF2H4
General transcription factor IIH subunit 4.
    
 0.916
GTF2E2
General transcription factor IIE subunit 2.
   
 0.913
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.