STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001229annotation not available (652 aa)    
Predicted Functional Partners:
HAL
Histidine ammonia-lyase.
 
 
 0.967
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.954
FTCD
Formimidoyltransferase cyclodeaminase.
  
  
 0.694
TXNRD3
Thioredoxin reductase 3.
      
 0.594
ENSCWAP00000027443
annotation not available
    
 
 0.575
ENSCWAP00000022860
annotation not available
    
 
 0.559
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
     
 0.526
PXDC1
PX domain containing 1.
      
 0.518
HSD17B14
Hydroxysteroid 17-beta dehydrogenase 14.
    
 
 0.514
SPRY3
Sprouty RTK signaling antagonist 3.
      
 0.493
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.