Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDX4Peroxiredoxin 4. (272 aa)    
Predicted Functional Partners:
TXNDC5
Thioredoxin domain containing 5.
  
 0.964
PDIA6
Protein disulfide isomerase family A member 6.
  
 0.953
PRDX5
Peroxiredoxin 5.
   
 0.953
ERP44
Endoplasmic reticulum protein 44.
  
 0.949
SRXN1
Sulfiredoxin 1.
   
 0.927
NME8
NME/NM23 family member 8.
  
 0.926
TXN
Thioredoxin.
  
 0.909
TXNDC8
Thioredoxin domain containing 8.
  
 0.893
ENSCWAP00000000492
annotation not available
   
   0.889
PRDX1
Peroxiredoxin 1.
   
   0.889
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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