STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001248annotation not available (262 aa)    
Predicted Functional Partners:
SPINDOC
Spindlin interactor and repressor of chromatin binding.
    
 
 0.787
GALNT6
Polypeptide N-acetylgalactosaminyltransferase 6.
      
 0.576
FOXQ1
Forkhead box Q1.
      
 0.565
BIN2
Bridging integrator 2.
      
 0.527
GGH
Gamma-glutamyl hydrolase.
      
 0.524
YRDC
yrdC N6-threonylcarbamoyltransferase domain containing.
    
   0.520
ENSCWAP00000001546
annotation not available
      
 0.495
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.477
TOPORS
TOP1 binding arginine/serine rich protein.
    
 
 0.459
CGGBP1
CGG triplet repeat binding protein 1.
    
   0.449
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.