STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LONRF3LON peptidase N-terminal domain and ring finger 3. (754 aa)    
Predicted Functional Partners:
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.769
BRCA1
BRCA1 DNA repair associated.
    
 0.692
ENSCWAP00000002640
annotation not available
    
 0.689
ENSCWAP00000020442
annotation not available
    
 0.689
UBB
Ubiquitin B.
    
 0.680
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.677
ENSCWAP00000006692
annotation not available
    
  0.649
RPS27A
Ribosomal protein S27a.
    
  0.649
ENSCWAP00000022461
annotation not available
    
  0.649
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
     
 0.638
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.