STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONRF3LON peptidase N-terminal domain and ring finger 3. (754 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.750
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.741
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.735
PRODH2
Proline dehydrogenase 2.
      
 0.727
ENSCWAP00000002640
annotation not available
    
 0.705
ENSCWAP00000020442
annotation not available
    
 0.705
MST1R
Macrophage stimulating 1 receptor.
    
 
 0.700
ENSCWAP00000006692
annotation not available
    
  0.698
RPS27A
Ribosomal protein S27a.
    
  0.698
ENSCWAP00000022461
annotation not available
    
  0.698
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.