STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C8orf33Chromosome 8 open reading frame 33. (237 aa)    
Predicted Functional Partners:
LYAR
Ly1 antibody reactive.
   
   0.839
REXO4
REX4 homolog, 3'-5' exonuclease.
   
   0.821
RPL3
Ribosomal protein L3.
    
   0.804
GRWD1
Glutamate rich WD repeat containing 1.
   
   0.799
RPL14
Ribosomal protein L14.
    
   0.792
KNOP1
Lysine rich nucleolar protein 1.
    
   0.789
ZC3H8
Zinc finger CCCH-type containing 8.
   
   0.778
RRP8
Ribosomal RNA processing 8.
   
   0.776
ZNF34
Zinc finger protein 34.
      
 0.586
LACTB2
Lactamase beta 2.
      
 0.584
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.