STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBXIP1PBX homeobox interacting protein 1. (729 aa)    
Predicted Functional Partners:
MDFI
MyoD family inhibitor.
    
   0.789
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
      
 0.761
GJC3
Gap junction protein gamma 3.
      
 0.679
ZMAT2
Zinc finger matrin-type 2.
      
 0.603
PDLIM4
PDZ and LIM domain 4.
      
 0.568
RSPH1
Radial spoke head component 1.
      
 0.524
WASHC3
WASH complex subunit 3.
    
   0.523
AZGP1
Alpha-2-glycoprotein 1, zinc-binding.
      
 0.498
PMVK
Phosphomevalonate kinase.
      
 0.496
RAB38
RAB38, member RAS oncogene family.
      
 0.496
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.