STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3BP1G3BP stress granule assembly factor 1. (465 aa)    
Predicted Functional Partners:
USP10
Ubiquitin specific peptidase 10.
   
 
 0.986
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.986
ATXN2
Ataxin 2.
   
 
 0.985
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.980
DDX6
DEAD-box helicase 6.
   
 
 0.977
FXR1
FMR1 autosomal homolog 1.
   
 
 0.976
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.975
UPF1
UPF1 RNA helicase and ATPase.
    
 0.972
FXR2
FMR1 autosomal homolog 2.
   
 
 0.971
HDAC6
Histone deacetylase 6.
    
 
 0.969
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.