STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPM1Nucleophosmin 1. (294 aa)    
Predicted Functional Partners:
NCL
Nucleolin.
   
 
 0.987
ENSCWAP00000027992
annotation not available
    
 0.972
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.961
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.961
ENSCWAP00000013956
annotation not available
   
 
 0.952
RUVBL1
RuvB like AAA ATPase 1.
   
 
 0.950
TP53
Tumor protein p53.
   
 0.912
NOP58
NOP58 ribonucleoprotein.
   
  
 0.892
MDM2
MDM2 proto-oncogene.
   
 
 0.878
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.868
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.