Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF250Zinc finger protein 250. (535 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.898
SERPINB13
Serpin family B member 13.
    
 
 0.760
KAT14
Lysine acetyltransferase 14.
    
 
 0.753
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.659
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
NKPD1
NTPase KAP family P-loop domain containing 1.
    
 
 0.620
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 
 0.612
XRCC3
X-ray repair cross complementing 3.
    
 
 0.601
PCSK2
Proprotein convertase subtilisin/kexin type 2.
    
 
 0.576
LIPG
Lipase G, endothelial type.
     
 0.575
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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