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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF250Zinc finger protein 250. (535 aa)    
Predicted Functional Partners:
KAT14
Lysine acetyltransferase 14.
    
 
 0.838
SERPINB13
Serpin family B member 13.
    
 
 0.768
NKPD1
NTPase KAP family P-loop domain containing 1.
    
 
 0.721
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 
 0.698
TRIM28
Tripartite motif containing 28.
    
 0.698
XRCC3
X-ray repair cross complementing 3.
    
 
 0.697
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.690
PCSK2
Proprotein convertase subtilisin/kexin type 2.
    
 
 0.654
LIPG
Lipase G, endothelial type.
     
 0.645
ZFHX3
Zinc finger homeobox 3.
    
 
 0.636
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.