STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD11Sterile alpha motif domain containing 11. (677 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
    
 
 0.857
ENSCWAP00000026745
annotation not available
      
 0.771
PGBD5
piggyBac transposable element derived 5.
    
 
 0.725
USH1G
USH1 protein network component sans.
    
 
 0.717
FAM83C
Family with sequence similarity 83 member C.
      
 0.689
ENSCWAP00000006953
annotation not available
      
 0.689
KCNN1
Potassium calcium-activated channel subfamily N member 1.
      
 0.689
ENSCWAP00000015507
annotation not available
    
 
 0.688
VPS9D1
VPS9 domain containing 1.
      
 0.668
ATP23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.659
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.