STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (335 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
0.959
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
0.892
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.883
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.865
SRSF2
Serine and arginine rich splicing factor 2.
  
 0.861
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.852
PAIP1
poly(A) binding protein interacting protein 1.
   
 0.843
CSDE1
Cold shock domain containing E1.
    
 0.842
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.836
ENSCWAP00000007523
annotation not available
   
 0.832
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.