STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A40Solute carrier family 25 member 40. (339 aa)    
Predicted Functional Partners:
TBC1D12
TBC1 domain family member 12.
      
 0.731
ENSCWAP00000011163
annotation not available
      
 0.606
SLC5A9
Solute carrier family 5 member 9.
      
 0.598
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.590
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.588
PUM2
Pumilio RNA binding family member 2.
    
   0.584
PUM1
Pumilio RNA binding family member 1.
    
   0.584
RUNDC3B
RUN domain containing 3B.
      
 0.583
TCF19
Transcription factor 19.
      
 0.583
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.556
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.