STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A40Solute carrier family 25 member 40. (339 aa)    
Predicted Functional Partners:
TBC1D12
TBC1 domain family member 12.
      
 0.755
ABCB4
ATP binding cassette subfamily B member 4.
     
 0.741
TXNL1
Thioredoxin like 1.
   
    0.696
WARS2
Tryptophanyl tRNA synthetase 2, mitochondrial.
   
  
 0.692
ENSCWAP00000000717
annotation not available
     
 0.691
ENSCWAP00000000801
annotation not available
     
 0.691
ENSCWAP00000001054
annotation not available
     
 0.691
ENSCWAP00000001101
annotation not available
     
 0.691
APOO
Apolipoprotein O.
      
 0.675
CACNA1A
Calcium voltage-gated channel subunit alpha1 A.
      
 0.641
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.