STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF34Zinc finger protein 34. (534 aa)    
Predicted Functional Partners:
RBM5
RNA binding motif protein 5.
   
    0.881
KAT14
Lysine acetyltransferase 14.
    
 
 0.744
NKPD1
NTPase KAP family P-loop domain containing 1.
    
 
 0.721
XRCC3
X-ray repair cross complementing 3.
    
 
 0.697
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.690
C8orf33
Chromosome 8 open reading frame 33.
      
 0.684
TRIM28
Tripartite motif containing 28.
    
 0.671
LIPG
Lipase G, endothelial type.
     
 0.645
ZFHX3
Zinc finger homeobox 3.
    
 
 0.636
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.