STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001339annotation not available (128 aa)    
Predicted Functional Partners:
MRPS6
Mitochondrial ribosomal protein S6.
  
  
 0.933
MRPL35
Mitochondrial ribosomal protein L35.
   
 
 0.888
MRPL21
Mitochondrial ribosomal protein L21.
   
  
 0.864
ENSCWAP00000011713
annotation not available
   
 
 0.850
EIF1AX
Eukaryotic translation initiation factor 1A X-linked.
   
  
 0.846
TOP3A
DNA topoisomerase III alpha.
  
 
 0.828
MRPS7
Mitochondrial ribosomal protein S7.
  
   0.805
MRTO4
MRT4 homolog, ribosome maturation factor.
   
    0.800
ENSCWAP00000019093
annotation not available
   
    0.800
CCDC105
Coiled-coil domain containing 105.
  
   0.795
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.