Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLX3T cell leukemia homeobox 3. (291 aa)    
Predicted Functional Partners:
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.768
ARX
Aristaless related homeobox.
    
 
 0.742
LHX1
LIM homeobox 1.
    
 
 0.733
PAX2
Paired box 2.
      
 0.716
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.635
LMX1B
LIM homeobox transcription factor 1 beta.
    
 
 0.635
GRPR
Gastrin releasing peptide receptor.
      
 0.623
PHOX2A
Paired like homeobox 2A.
   
 
 0.618
PTF1A
Pancreas associated transcription factor 1a.
      
 0.615
PAX5
Paired box 5.
      
 0.601
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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