close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLX3T cell leukemia homeobox 3. (291 aa)    
Predicted Functional Partners:
LHX1
LIM homeobox 1.
    
 
 0.796
OLIG3
Oligodendrocyte transcription factor 3.
      
 0.792
PAX2
Paired box 2.
      
 0.759
GRPR
Gastrin releasing peptide receptor.
      
 0.725
LMX1B
LIM homeobox transcription factor 1 beta.
    
 
 0.719
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.717
ARX
Aristaless related homeobox.
    
 
0.703
PAX5
Paired box 5.
      
 0.684
WDR4
WD repeat domain 4.
      
 0.650
PRDM13
PR/SET domain 13.
    
 
 0.618
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.