Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SGSM2Small G protein signaling modulator 2. (1051 aa)    
Predicted Functional Partners:
CETN3
Centrin 3.
    
   0.804
ENSCWAP00000023968
annotation not available
    
 
 0.793
PTPRN
Protein tyrosine phosphatase receptor type N.
    
 
 0.793
PEX1
Peroxisomal biogenesis factor 1.
      
 0.754
KCNK4
Potassium two pore domain channel subfamily K member 4.
      
 0.754
CETN1
Centrin 1.
    
   0.742
CETN2
Centrin 2.
    
   0.742
SGSM3
Small G protein signaling modulator 3.
      
 0.696
SMG6
SMG6 nonsense mediated mRNA decay factor.
   
  
 0.597
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
      
 0.583
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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