STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (803 aa)    
Predicted Functional Partners:
RHOA
Ras homolog family member A.
    
 0.766
CDC42
Cell division cycle 42.
    
 0.758
MYO9A
Myosin IXA.
    
0.701
GINM1
Glycoprotein integral membrane 1.
      
 0.677
ZC4H2
Zinc finger C4H2-type containing.
      
 0.669
ENSCWAP00000005035
annotation not available
    
 0.665
RHOB
Ras homolog family member B.
    
 0.665
PAQR5
Progestin and adipoQ receptor family member 5.
   
  
 0.659
ARHGAP4
Rho GTPase activating protein 4.
    
 
0.627
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.625
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.