STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STX10Syntaxin 10. (249 aa)    
Predicted Functional Partners:
VAMP4
Vesicle associated membrane protein 4.
    
 0.998
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.994
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
   
 0.993
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.993
STX12
Syntaxin 12.
    
 0.985
VAMP3
Vesicle associated membrane protein 3.
    
 0.984
STX7
Syntaxin 7.
    
 0.981
VAMP8
Vesicle associated membrane protein 8.
    
 0.972
VPS45
Vacuolar protein sorting 45 homolog.
    
 
 0.969
YKT6
YKT6 v-SNARE homolog.
    
 0.968
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.