STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L4AErythrocyte membrane protein band 4.1 like 4A. (686 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.921
EML6
EMAP like 6.
      
 0.763
KIAA1755
KIAA1755.
      
 0.763
SLC6A7
Solute carrier family 6 member 7.
      
 0.739
TCEA2
Transcription elongation factor A2.
      
 0.705
TLCD3B
TLC domain containing 3B.
      
 0.692
ARHGAP1
Rho GTPase activating protein 1.
      
 0.678
DYNLL2
Dynein light chain LC8-type 2.
      
 0.675
ITM2C
Integral membrane protein 2C.
      
 0.671
ARHGEF37
Rho guanine nucleotide exchange factor 37.
      
 0.670
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.