STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABS1Calcium binding protein, spermatid associated 1. (387 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex 1.
    
   0.736
MAP11
Microtubule associated protein 11.
    
   0.713
TRAPPC2L
Trafficking protein particle complex 2 like.
    
   0.707
TRAPPC5
Trafficking protein particle complex 5.
    
   0.704
TTC21A
Tetratricopeptide repeat domain 21A.
      
 0.654
SHCBP1L
SHC binding and spindle associated 1 like.
      
 0.650
ENKUR
Enkurin, TRPC channel interacting protein.
      
 0.648
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.629
ENSCWAP00000028352
annotation not available
      
 0.624
CATSPER3
Cation channel sperm associated 3.
      
 0.608
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.