Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC9Thioredoxin domain containing 9. (226 aa)    
Predicted Functional Partners:
CCT5
Chaperonin containing TCP1 subunit 5.
   
 
 0.958
CCT7
Chaperonin containing TCP1 subunit 7.
   
 
 0.954
CCT2
Chaperonin containing TCP1 subunit 2.
   
 
 0.952
CCT3
Chaperonin containing TCP1 subunit 3.
   
 
 0.951
FBXW4
F-box and WD repeat domain containing 4.
    
   0.948
WDR86
WD repeat domain 86.
    
   0.948
KLHDC8A
Kelch domain containing 8A.
    
   0.945
PEX7
Peroxisomal biogenesis factor 7.
    
   0.939
TCP1
T-complex 1.
   
 
 0.893
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
   0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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