STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAGL1PLAG1 like zinc finger 1. (463 aa)    
Predicted Functional Partners:
DIRAS3
DIRAS family GTPase 3.
    
 
 0.702
SGCE
Sarcoglycan epsilon.
      
 0.691
MEST
Mesoderm specific transcript.
      
 0.661
DLK1
Delta like non-canonical Notch ligand 1.
    
 
 0.650
NAP1L5
Nucleosome assembly protein 1 like 5.
    
 
 0.646
NNAT
Neuronatin.
   
  
 0.639
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
      
 0.635
PHLDA2
Pleckstrin homology like domain family A member 2.
      
 0.617
GATM
Glycine amidinotransferase.
    
 
 0.606
RTL1
Retrotransposon Gag like 1.
    
 
 0.604
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.