SLC25A43 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SLC25A43

Solute carrier family 25 member 43. (341 aa)

Predicted Functional Partners:

ENSCWAP00000011123

0.846

ENSCWAP00000018117

0.846

SLC25A53

0.746

RPL14

0.704

RPL8

0.666

FRMD7

0.642

RPS3

0.632

RPL11

0.627

ENSCWAP00000013956

0.625

ENSCWAP00000013110

0.618

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000011123	ENSCWAP00000013110	ENSCWAP00000011123	ENSCWAP00000013110	annotation not available	annotation not available	0.999
ENSCWAP00000011123	ENSCWAP00000013956	ENSCWAP00000011123	ENSCWAP00000013956	annotation not available	annotation not available	0.999
ENSCWAP00000011123	ENSCWAP00000018117	ENSCWAP00000011123	ENSCWAP00000018117	annotation not available	annotation not available	0.996
ENSCWAP00000011123	RPL11	ENSCWAP00000011123	ENSCWAP00000020354	annotation not available	Ribosomal protein L11.	0.999
ENSCWAP00000011123	RPL14	ENSCWAP00000011123	ENSCWAP00000017401	annotation not available	Ribosomal protein L14.	0.999
ENSCWAP00000011123	RPL8	ENSCWAP00000011123	ENSCWAP00000001364	annotation not available	Ribosomal protein L8.	0.999
ENSCWAP00000011123	RPS3	ENSCWAP00000011123	ENSCWAP00000002419	annotation not available	Ribosomal protein S3.	0.999
ENSCWAP00000011123	SLC25A43	ENSCWAP00000011123	ENSCWAP00000001388	annotation not available	Solute carrier family 25 member 43.	0.846
ENSCWAP00000013110	ENSCWAP00000011123	ENSCWAP00000013110	ENSCWAP00000011123	annotation not available	annotation not available	0.999
ENSCWAP00000013110	ENSCWAP00000013956	ENSCWAP00000013110	ENSCWAP00000013956	annotation not available	annotation not available	0.999
ENSCWAP00000013110	ENSCWAP00000018117	ENSCWAP00000013110	ENSCWAP00000018117	annotation not available	annotation not available	0.999
ENSCWAP00000013110	RPL11	ENSCWAP00000013110	ENSCWAP00000020354	annotation not available	Ribosomal protein L11.	0.999
ENSCWAP00000013110	RPL14	ENSCWAP00000013110	ENSCWAP00000017401	annotation not available	Ribosomal protein L14.	0.999
ENSCWAP00000013110	RPL8	ENSCWAP00000013110	ENSCWAP00000001364	annotation not available	Ribosomal protein L8.	0.999
ENSCWAP00000013110	RPS3	ENSCWAP00000013110	ENSCWAP00000002419	annotation not available	Ribosomal protein S3.	0.999
ENSCWAP00000013110	SLC25A43	ENSCWAP00000013110	ENSCWAP00000001388	annotation not available	Solute carrier family 25 member 43.	0.618
ENSCWAP00000013956	ENSCWAP00000011123	ENSCWAP00000013956	ENSCWAP00000011123	annotation not available	annotation not available	0.999
ENSCWAP00000013956	ENSCWAP00000013110	ENSCWAP00000013956	ENSCWAP00000013110	annotation not available	annotation not available	0.999
ENSCWAP00000013956	ENSCWAP00000018117	ENSCWAP00000013956	ENSCWAP00000018117	annotation not available	annotation not available	0.999
ENSCWAP00000013956	RPL11	ENSCWAP00000013956	ENSCWAP00000020354	annotation not available	Ribosomal protein L11.	0.999