Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUS3Pseudouridine synthase 3. (479 aa)    
Predicted Functional Partners:
PUS7
Pseudouridine synthase 7.
   
 
 0.899
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.897
ELP3
Elongator acetyltransferase complex subunit 3.
   
 
 0.893
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.891
TRUB1
TruB pseudouridine synthase family member 1.
   
 0.885
MOCS3
Molybdenum cofactor synthesis 3.
   
 
 0.868
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.849
ENSCWAP00000022474
annotation not available
    
 
 0.820
WDR4
WD repeat domain 4.
   
 
 0.808
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
    0.802
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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