STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS3Pseudouridine synthase 3. (479 aa)    
Predicted Functional Partners:
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.929
MRPL17
Mitochondrial ribosomal protein L17.
  
  
 0.893
TRUB1
TruB pseudouridine synthase family member 1.
   
 0.881
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.868
POLR2C
RNA polymerase II subunit C.
  
  
 0.862
POLR1C
RNA polymerase I and III subunit C.
  
  
 0.862
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.848
PUS7
Pseudouridine synthase 7.
   
 
 0.848
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
    0.844
RPF2
Ribosome production factor 2 homolog.
   
    0.820
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.