Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM221AFamily with sequence similarity 221 member A. (298 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
    
   0.916
SNX1
Sorting nexin 1.
    
   0.785
SNX32
Sorting nexin 32.
    
   0.718
SNX6
Sorting nexin 6.
    
   0.718
STOML1
Stomatin like 1.
      
 0.596
SFTA2
Surfactant associated 2.
      
 0.585
HTRA3
HtrA serine peptidase 3.
      
 0.584
FLRT2
Fibronectin leucine rich transmembrane protein 2.
      
 0.583
FMNL1
Formin like 1.
      
 0.581
UPK2
Uroplakin 2.
      
 0.566
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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