Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DBF4DBF4 zinc finger. (675 aa)    
Predicted Functional Partners:
CDC7
Cell division cycle 7.
   
 0.999
MCM4
Minichromosome maintenance complex component 4.
   
 0.995
MCM2
Minichromosome maintenance complex component 2.
   
 0.994
ORC6
Origin recognition complex subunit 6.
   
 0.992
MCM7
Minichromosome maintenance complex component 7.
   
 0.992
ORC4
Origin recognition complex subunit 4.
    
 0.991
ORC2
Origin recognition complex subunit 2.
   
 0.990
MCM3
Minichromosome maintenance complex component 3.
   
 0.988
ORC5
Origin recognition complex subunit 5.
    
 0.982
CDC45
Cell division cycle 45.
   
 0.978
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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