STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL1ADAMTS like 1. (1618 aa)    
Predicted Functional Partners:
POFUT2
Protein O-fucosyltransferase 2.
     
 0.736
ADAMTS9
ADAM metallopeptidase with thrombospondin type 1 motif 9.
     
 0.610
ADAMTS16
ADAM metallopeptidase with thrombospondin type 1 motif 16.
     
 0.606
DENND2A
DENN domain containing 2A.
      
 0.585
ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif 20.
     
 0.580
ADAMTSL5
ADAMTS like 5.
     
 0.580
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
     
 0.564
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
     
 0.557
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
     
 0.557
NEO1
Neogenin 1.
    
 
 0.556
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.