STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NREPNeuronal regeneration related protein. (70 aa)    
Predicted Functional Partners:
C1orf74
Chromosome 1 open reading frame 74.
      
 0.717
PLXDC2
Plexin domain containing 2.
      
 0.688
PTPN9
Protein tyrosine phosphatase non-receptor type 9.
      
 0.688
RNF38
Ring finger protein 38.
      
 0.683
RNF44
Ring finger protein 44.
      
 0.680
SLC12A1
Solute carrier family 12 member 1.
      
 0.666
USP54
Ubiquitin specific peptidase 54.
      
 0.659
CRLS1
Cardiolipin synthase 1.
      
 0.645
USP33
Ubiquitin specific peptidase 33.
      
 0.605
RBP1
Retinol binding protein 1.
      
 0.596
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.