STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERP2Stress associated endoplasmic reticulum protein family member 2. (71 aa)    
Predicted Functional Partners:
SEC61B
SEC61 translocon beta subunit.
   
 0.961
ENSCWAP00000006276
annotation not available
   
 0.918
SEC61G
SEC61 translocon gamma subunit.
   
 0.918
SSR1
Signal sequence receptor subunit 1.
   
 
 0.836
ENSCWAP00000013110
annotation not available
   
   0.835
RPL23
Ribosomal protein L23.
    
   0.833
RPL27
Ribosomal protein L27.
   
   0.833
RPL34
Ribosomal protein L34.
    
   0.830
RPL4
Ribosomal protein L4.
   
   0.810
SSR4
Signal sequence receptor subunit 4.
   
   0.807
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.