STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERP2Stress associated endoplasmic reticulum protein family member 2. (71 aa)    
Predicted Functional Partners:
SEC61B
SEC61 translocon beta subunit.
   
 
 0.715
SGTA
Small glutamine rich tetratricopeptide repeat containing alpha.
    
 0.631
LRRIQ3
Leucine rich repeats and IQ motif containing 3.
      
 0.622
STX5
Syntaxin 5.
     
 0.621
FPGT
Fucose-1-phosphate guanylyltransferase.
      
 0.606
CYB5A
Cytochrome b5 type A.
     
 0.594
ENSCWAP00000021022
annotation not available
   
 
 0.586
ENSCWAP00000006276
annotation not available
   
 
 0.585
SEC61G
SEC61 translocon gamma subunit.
   
 
 0.585
SGTB
Small glutamine rich tetratricopeptide repeat containing beta.
    
 0.580
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.