Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1BZinc finger C2HC-type containing 1B. (220 aa)    
Predicted Functional Partners:
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 
 0.858
CAPSL
Calcyphosine like.
    
   0.753
CAPS
Calcyphosine.
    
   0.753
ZDHHC22
Zinc finger DHHC-type containing 22.
      
 0.699
SEC22C
SEC22 homolog C, vesicle trafficking protein.
      
 0.695
FAM163B
Family with sequence similarity 163 member B.
      
 0.643
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
      
 0.602
METTL25
Methyltransferase like 25.
    
 
 0.566
SEC22A
SEC22 homolog A, vesicle trafficking protein.
      
 0.502
ENSCWAP00000027047
annotation not available
      
 0.487
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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