STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED4Zinc finger BED-type containing 4. (1160 aa)    
Predicted Functional Partners:
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
    
 
 0.870
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.793
SRARP
Steroid receptor associated and regulated protein.
      
 0.697
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
      
 0.685
ENSCWAP00000001720
annotation not available
    
 
 0.672
KCTD2
Potassium channel tetramerization domain containing 2.
    
  0.664
PIM3
Pim-3 proto-oncogene, serine/threonine kinase.
      
 0.588
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.567
SUMO1
Small ubiquitin like modifier 1.
    
  0.545
ENSCWAP00000027558
annotation not available
    
  0.545
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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