STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATE2Prostate and testis expressed 2. (113 aa)    
Predicted Functional Partners:
PATE3
Prostate and testis expressed 3.
  
   
 0.834
ADD1
Adducin 1.
      
 0.658
GLB1L2
Galactosidase beta 1 like 2.
      
 0.643
GLB1L3
Galactosidase beta 1 like 3.
      
 0.643
TEDDM1
Transmembrane epididymal protein 1.
      
 0.629
TOMM20
Translocase of outer mitochondrial membrane 20.
      
 0.575
GDPD2
Glycerophosphodiester phosphodiesterase domain containing 2.
      
 0.548
NSRP1
Nuclear speckle splicing regulatory protein 1.
      
 0.522
ELSPBP1
Epididymal sperm binding protein 1.
      
 0.493
ERICH4
Glutamate rich 4.
  
     0.486
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.